World Microbiome Day

A collection of Nature Ecology & Evolution articles on microbiomes, including this year's specific focus on antibiotic resistance.
World Microbiome Day
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The microbiome beyond the horizon of ecological and evolutionary theory


Assessing evolutionary risks of resistance for new antimicrobial therapies


Adaptive modulation of antibiotic resistance through intragenomic coevolution


Coordinated change at the colony level in fruit bat fur microbiomes through time (plus News & Views)


Community richness of amphibian skin bacteria correlates with bioclimate at the global scale (plus News & Views)


Compensatory mutations improve general permissiveness to antibiotic resistance plasmids


Function and functional redundancy in microbial systems


Range-expansion effects on the belowground plant microbiome


A macroecological theory of microbial biodiversity


Multicopy plasmids potentiate the evolution of antibiotic resistance in bacteria


Palaeoclimate explains a unique proportion of the global variation in soil bacterial communities


High taxonomic variability despite stable functional structure across microbial communities (plus News & Views)


Identifying and exploiting genes that potentiate the evolution of antibiotic resistance


Drug-mediated metabolic tipping between antibiotic resistant states in a mixed-species community (plus News & Views)


A submarine volcanic eruption leads to a novel microbial habitat (plus News & Views)


Within-host dynamics shape antibiotic resistance in commensal bacteria (plus News & Views)


Diverse modes of eco-evolutionary dynamics in communities of antibiotic-producing microorganisms


Gene exchange drives the ecological success of a multi-host bacterial pathogen


Hologenomic adaptations underlying the evolution of sanguivory in the common vampire bat


Climate warming reduces gut microbiota diversity in a vertebrate ectotherm


The unconstrained evolution of fast and efficient antibiotic-resistant bacterial genomes (plus News & Views)


Positive selection inhibits gene mobilization and transfer in soil bacterial communities


Competition along trajectories governs adaptation rates towards antimicrobial resistance


Multicopy plasmids allow bacteria to escape from fitness trade-offs during evolutionary innovation


Frequency-dependent selection in vaccine-associated pneumococcal population dynamics